| 1ª Classificatória | 2ª Classificatória | 3ª Classificatória | Play-off | 1ª Fase | 2ª Fase |
| 3ª Fase | Quartas de final | Semifinais | Final |
Round:
Played
1st Round
09/15/2016 - Thursday
15:05
Braga
1
x
1
Gent
15:05
Konyaspor
0
x
1
Shakhtar Donetsk
2nd Round
09/29/2016 - Thursday
13:00
Gent
2
x
0
Konyaspor
13:00
Shakhtar Donetsk
2
x
0
Braga
3rd Round
10/20/2016 - Thursday
13:00
Konyaspor
1
x
1
Braga
13:00
Shakhtar Donetsk
5
x
0
Gent
4th Round
11/03/2016 - Thursday
16:05
Braga
3
x
1
Konyaspor
16:05
Gent
3
x
5
Shakhtar Donetsk
5th Round
11/24/2016 - Thursday
13:00
Gent
2
x
2
Braga
13:00
Shakhtar Donetsk
4
x
0
Konyaspor
6th Round
12/08/2016 - Thursday
11:00
Braga
2
x
4
Shakhtar Donetsk
11:00
Konyaspor
0
x
1
Gent